Materials
This page contains an outline of the topics, content, and assignments for the workshop. Video recordings will be added after the workshop has ended. Example dataset can be downloaded here.
| Date | Topic | Slides | Code | Video Recording |
|---|---|---|---|---|
| Thurs, Sep 8 | Intro to behavioral state estimation | |||
| Clean and explore tracks | ||||
Fit SSM via aniMotum |
Lecture, Live-coding | |||
Fit HMM via momentuHMM |
Lecture, Live-coding | |||
Fit NP Bayesian models via bayesmove |
Lecture, Live-coding | |||
| Compare behavioral state estimates | ||||
| Recommended guidelines for selecting a method | ||||
| Fri, Sep 9 | Intro to space-use estimation | |||
Estimate space-use with MCP via amt |
||||
Estimate space-use with KDE via amt |
Lecture, Live-coding | |||
Estimate space-use with dBBMM via move |
Lecture, Live-coding | |||
| Compare space-use estimates | ||||
| Recommended guidelines for selecting a method |